Complex Trait Analysis of Next Generation Sequence Data

November 11-15, 2019
Max Delbrück Center (MDC) for Molecular Medicine
Berlin, Germany

General Information

The fifth annual course on Complex Trait Analysis of Next Generation Sequence Data will be held at the MDC in Berlin from November 11-15, 2019. The goal of the course is to teach both the theory and application of methods to analyze next-generation sequence (NGS) data for human complex traits. Attendees will learn how to design studies, call variants from NGS data, analysis of population-, trio- and family-based sequence data and evaluation of variant functionality. Analyses will include performing complex trait rare variant association analysis for population and trio data. Exercises will be carried out using a variety of computer programs (GATK, IGV, Polyphen2, PSEQ, SEQPower, SEQSpark and Variant Association Tools (VAT)). TOPICS will be include: sequence alignment, calling variants from NGS data, quality control of NGS data, association testing framework for quantitative and qualitative traits (fixed effects, random effects and mixed models), rare variant association methods, estimating power and sample size for rare variant association studies, imputation of rare variants and their analysis, and evaluating variant conservation and functionality.

Instructors

The instructors for the course are Suzanne Leal (Columbia University) and Michael Nothnagel (University of Cologne).

More Information

The cost of the 5-day course is 975 EUR for researchers from an academic institution, and 1,950 EUR for individuals from private (for profit) companies. This fee covers tuition, Monday evening wine and cheese party and course-related expenses (handouts, etc.) but not room, board or meals. Inexpensive housing is available for course participants at the MDC and nearby hotels. The maximum number of participants is 35.

For additional information on the course please contact Suzanne Leal:

email: sml3@cumc.columbia.edu or suzannemleal@gmail.com
Tel: +1 (713) 798-4011
Fax: +1 (713) 798-4012

Click here for course schedule
Click here for the application form
Click here for course flyer (please post and distribute)
Click here for maps and directions to the MDC
Click here for the information on MDC Housing
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Complex Trait Analysis of Next Generation Sequence Data

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