Difference between revisions of "Tutorials"
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We have created a debian repository to make it easier to use our tutorials. Using this repository will require that you have administrator access to the computer on which you'll be using them. If you don't have this level of access, we also provide a pre-configured virtual machine image that will allow you to install software as root. | We have created a debian repository to make it easier to use our tutorials. Using this repository will require that you have administrator access to the computer on which you'll be using them. If you don't have this level of access, we also provide a pre-configured virtual machine image that will allow you to install software as root. | ||
| − | The VM Image is available [https://statgen.research.bcm.edu/files/images/Statgen.ova here] | + | The VM Image is available [https://statgen.research.bcm.edu/files/images/Statgen.ova here]. The password for the student account is "LetMeIn". Feel free to change it to whatever you like. |
If you would like to use our repository on a VM or on your computer, follow these configuration steps. Please run as the root user or using the sudo command. | If you would like to use our repository on a VM or on your computer, follow these configuration steps. Please run as the root user or using the sudo command. | ||
| − | <pre> | + | <pre>sudo add-apt-repository ppa:webupd8team/java |
| − | sudo add-apt-repository ppa:webupd8team/java | + | |
sudo echo "deb [trusted=yes] https://statgen.research.bcm.edu/deb ./" > /etc/apt/sources.list.d/statgen.list | sudo echo "deb [trusted=yes] https://statgen.research.bcm.edu/deb ./" > /etc/apt/sources.list.d/statgen.list | ||
sudo apt-get update | sudo apt-get update | ||
Revision as of 19:05, 12 April 2018
Contents
Running Tutorials on Your Computer
We have created a debian repository to make it easier to use our tutorials. Using this repository will require that you have administrator access to the computer on which you'll be using them. If you don't have this level of access, we also provide a pre-configured virtual machine image that will allow you to install software as root.
The VM Image is available here. The password for the student account is "LetMeIn". Feel free to change it to whatever you like.
If you would like to use our repository on a VM or on your computer, follow these configuration steps. Please run as the root user or using the sudo command.
sudo add-apt-repository ppa:webupd8team/java sudo echo "deb [trusted=yes] https://statgen.research.bcm.edu/deb ./" > /etc/apt/sources.list.d/statgen.list sudo apt-get update
SEQSpark
Installing Packages
To install from packages, follow the configuration steps above and run the following command.
sudo apt-get install seqspark-tutorial
The exercise's files will then be installed in /home/shared/seqspark. You can run from there or copy the files into your user's home directory and proceed with the exercise.
