Tutorials

Running Tutorials on Your Computer

We have created a debian repository to make it easier to use our tutorials. Using this repository will require that you have administrator access to the computer on which you'll be using them. If you don't have this level of access, we also provide a pre-configured virtual machine image that will allow you to install software as root.

The VM Image is available here

If you would like to use our repository on VM or on your computer, follow these configuration steps. Please run as the root user or using the sudo command.

add-apt-repository ppa:webupd8team/java
echo "deb [trusted=yes] https://statgen.research.bcm.edu/deb ./" > /etc/apt/sources.list.d/statgen.list
apt-get update

SEQSpark

• SEQSpark Exercise [PDF]

Variant Association Tools

• VAT Exercise [PDF]