Changes

From Statistical Genetics Courses

Jump to: navigation, search

Tutorials

446 bytes added, 17:09, 12 April 2018
/* SEQSpark */
==SEQSpark==
* [https://statgen.research.bcm.edu/files/tutorials/seqspark/SEQSpark_exercise_Final_v3.pdf SEQSpark Exercise <nowiki>[PDF]</nowiki>]
* [http://statgen.us/files/images/SEQSpark.ova Virtual Machine Image]
* To install from packages, folow the configuration steps above and run the following commands as an root on your computer.
<pre>
apt-get install oracle-java8-installer hadoop seqspark-tutorial
</pre>
The exercise's files will then be installed in /home/shared/seqspark. You can run from there or copy the files into your user's home directory and proceed with the exercise.
==Variant Association Tools==
* [https://statgen.research.bcm.edu/files/tutorials/vat/VAT_exercise_2018%20with_graphs.pdf VAT Exercise <nowiki>[PDF]</nowiki>]