Changes
From Statistical Genetics Courses
/* Preparing Your Computer */
* [https://github.com/statgenetics/statgen-courses/wiki/How-to-launch-course-tutorials#option-2-launch-from-command-shell Instructions to run course tutorial through command line terminal]
===Preparing Your Computer===
{| class="wikitable"
|-
||{{#ev:youtube|3K-sGzxsyK0|240|center|Linux}}
||{{#ev:youtube|DRCDNBlxZ-w|240|center|Mac}}
||{{#ev:youtube|sxv45NCSFMk|240|center|Windows}}
|}
===Running Exercises===
{{#ev:youtube|OgHvRVtIIog|320}}
===Tutorial specific instructions===
==Alohomora==
* [http://statgen.us/files/tutorials/seqspark/Alohomora_Exercise_revised.pdf Exercise <nowiki>[PDF]</nowiki>]
* [https://statgen.research.bcm.edu/files/2016/10/data/alohomora.zip Data Set]
* [http://gmc.mdc-berlin.de/alohomora/ Software Link]
==MR-JTI for TWAS==
* [https://github.com/statgenetics/statgen-courses/blob/master/notebooks/MR_JTI.ipynb MR-JTI Exercise <nowiki>[IPython Notebook]</nowiki>] '''Under Development'''
To run the exercise from docker image provided,
<pre>statgen-setup login launch --tutorial twas
</pre>
<pre>statgen-setup login --tutorial pseq
</pre>
==R and PLINK==
To run the exercise from docker image provided,
<pre>statgen-setup launch --tutorial plink-r-nothnagel
</pre>
==REGENIE==
