Changes
From Statistical Genetics Courses
/* Statistical Genetics Software */
==Welcome to the Center for Statistical Genetics==We are a group of statistical geneticists in [httpshttp://wwwcolumbianeuroresearch.bcmorg/sergievsky/ The Gertrude H.eduSergievsky Center] and [http:/research/labswww.columbianeurology.org/center-for-statistical-genetics/center-members Members Department of the Center for Statistical GeneticsNeurology]========at [httphttps://www.ncbips.nlmcolumbia.nihedu Columbia University Vagelos College of Physicians and Surgeons] in New York City.gov/myncbi/browse/collection/43289644/?sortWe focus on both the research and education of statistical genetics and genetic epidemiology. =date&direction=ascending Publications]=Director=======* [[Genetic Meetings of InterestSuzanne_M_Leal_PhD|Genetic Meetings of InterestSuzanne M. Leal, PhD]]====
==Statistical Genetics Software==
* [httphttps://tigerwanggithub.orgcom/softwaregaow/kbac KBAC]* [https://github.com/statgenetics/mendelprob MendelProb]
* [https://code.google.com/p/phenoman/ PhenoMan]
* [http://bioinformatics.org/simped/rare/ RarePedSim]
* [http://www.bioinformatics.org/rv-gdt/ RV-GDT]
* [http://bioinformatics.org/rv-tdt/wiki/ RV-TDT]
* [https://github.com/statgenetics/rvnpl RV-NPL]
* [http://www.bioinformatics.org/seqlink/ SEQLinkage]
* [http://www.bioinformatics.org/spower/start SEQPower]
* [https://github.com/statgenetics/seqspark SEQSpark]
* [http://bioinformatics.org/simped SimPed]
* [https://code.google.com/p/simrare/ SimRare]
* [[VMT|Variant Mendelian Tools]]
==[[Tutorials]]==
* [[Tutorials#Annotation|Annotation]]
* [[Tutorials#Cochran_Armitage_Trend_Test|Cochran Armitage Trend Test]]
* [[Tutorials#GATK_and_IGV|GATK and IGV]]
* [[Tutorials#GenABEL|GenABEL]]
* [[Tutorials#GWAS:_Data_Quality_Control|GWAS: QC]]
* [[Tutorials#GWAS:_Association_Analysis_Controlling_for_Population_Substructure|GWAS: Controlling for Population Substructure]]
* [[Tutorials#Population_Genetics|Population Genetics]]
* [[Tutorials#PSEQ|PSEQ]]
* [[Tutorials#Regression|Regression]]
* [[Tutorials#RV-TDT|RV-TDT]]
* [[Tutorials#SEQLinkage|SEQLinkage]]
* [[Tutorials#SEQSpark|SEQSpark]]
* [[Tutorials#Variant_Association_Tools|Variant Association Tools]]
<!--
===SeqSpark===
* [http://statgen.us/files/tutorials/seqspark/SEQSpark_exercise_Final_v4.pdf PDF]
* [http://statgen.us/files/images/SEQSpark.ova Virtual Machine Image]
* [[Tutorials#SEQSpark|Instructions for package installation]]
===Variant Association Tools===
* [http://statgen.us/files/tutorials/vat/VAT_exercise_2018%20with_graphs.pdf PDF]
-->
==[[Genetic Meetings of Interest]]==
==Statistical Genetics Courses==
[[NGSMendelian2017|Identifying Genes for Mendelian Traits using Next Generation Sequence Data]], September 18-22, 2017<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany
