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Consult ==Welcome to the Center for Statistical Genetics==We are a group of statistical geneticists in [http://meta.wikimediacolumbianeuroresearch.org/wikisergievsky/HelpThe Gertrude H. Sergievsky Center] and [http:Contents User's Guide//www.columbianeurology.org/ Department of Neurology] for information at [https://www.ps.columbia.edu Columbia University Vagelos College of Physicians and Surgeons] in New York City. We focus on using both the wiki softwareresearch and education of statistical genetics and genetic epidemiology.

== Getting started =Director===* [[Suzanne_M_Leal_PhD|Suzanne M. Leal, PhD]] ==Statistical Genetics Software==* [https://github.com/gaow/kbac KBAC]* [https://github.com/statgenetics/mendelprob MendelProb]* [https://code.google.com/p/phenoman/ PhenoMan]* [http://bioinformatics.org/simped/rare/ RarePedSim]* [http://www.mediawikibioinformatics.org/rv-gdt/ RV-GDT]* [http://bioinformatics.org/rv-tdt/wiki/SpecialRV-TDT]* [https:MyLanguage/Manual/github.com/statgenetics/rvnpl RV-NPL]* [http:Configuration_settings Configuration settings list//www.bioinformatics.org/seqlink/ SEQLinkage]* [http://www.mediawikibioinformatics.org/wikispower/Specialstart SEQPower]* [https:MyLanguage/Manual/github.com/statgenetics/seqspark SEQSpark]* [http:FAQ MediaWiki FAQ//bioinformatics.org/simped SimPed]* [https://listscode.wikimediagoogle.orgcom/mailmanp/listinfosimrare/mediawikiSimRare]* [http://varianttools.sourceforge.net/Association/HomePage Variant Association Tools]* [[VMT|Variant Mendelian Tools]] ==[[Tutorials]]==* [[Tutorials#Annotation|Annotation]]* [[Tutorials#Cochran_Armitage_Trend_Test|Cochran Armitage Trend Test]]* [[Tutorials#GATK_and_IGV|GATK and IGV]]* [[Tutorials#GenABEL|GenABEL]]* [[Tutorials#GWAS:_Data_Quality_Control|GWAS: QC]]* [[Tutorials#GWAS:_Association_Analysis_Controlling_for_Population_Substructure|GWAS: Controlling for Population Substructure]]* [[Tutorials#Population_Genetics|Population Genetics]]* [[Tutorials#PSEQ|PSEQ]]* [[Tutorials#Regression|Regression]]* [[Tutorials#RV-announce MediaWiki release mailing listTDT|RV-TDT]]* [[Tutorials#SEQLinkage|SEQLinkage]]* [[Tutorials#SEQSpark|SEQSpark]]* [[Tutorials#Variant_Association_Tools|Variant Association Tools]] <!--===SeqSpark===* [http://statgen.us/files/tutorials/seqspark/SEQSpark_exercise_Final_v4.pdf PDF]* [http://statgen.us/files/images/SEQSpark.ova Virtual Machine Image]* [[Tutorials#SEQSpark|Instructions for package installation]] ===Variant Association Tools===* [http://statgen.us/files/tutorials/vat/VAT_exercise_2018%20with_graphs.pdf PDF]-->==[[Genetic Meetings of Interest]]====Statistical Genetics Courses==[[NGSMendelian2017|Identifying Genes for Mendelian Traits using Next Generation Sequence Data]], September 18-22, 2017<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [[Genassoc2017|Genetic Association Course With Application to Sequence and Genotype Data]], June 26-30, 2017<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [[ComplexNGS2017|Complex Trait Analysis of Next Generation Sequence Data]], March 6-10, 2017 <br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [[Advgenemap2017|Advanced Gene Mapping Course]], January 23-27, 2017 <br /> The Rockefeller University, New York [[NGSMendelian2016|Identifying Genes for Mendelian Traits using Next Generation Sequence Data]], October 31-November 4, 2016<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [[Genassoc2016|Genetic Association Course With Application to Sequence and Genotype Data]], September 5-9, 2016<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [[ComplexNGS2016|Complex Trait Analysis of Next Generation Sequence Data]], July 4-8, 2016 <br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [[Advgenemap2016|Advanced Gene Mapping Course]], January 25-29, 2016 <br /> The Rockefeller University, New York [https://www.mediawikibcm.orgedu/wikiresearch/Speciallabs/center-for-statistical-genetics/courses/ngs-mendelian-course-sept-oct-2015 Identifying Genes for Mendelian Traits using Next Generation Sequence Data,] Sept. 28-Oct. 2, 2015<br />Max Delbrück Center (MDC) for Molecular Medicine<br />Berlin, Germany [https:MyLanguage/Localisation#Translation_resources Localise MediaWiki /www.bcm.edu/research/labs/center-for your language-statistical-genetics/courses/genetic-association-course-june-2015 Genetic Association Course With Application to Sequence and Genotype Data], June 22-26, 2015<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [[2015MarchMDC|Complex Trait Analysis of Next Generation Sequence Data]], March 23-27, 2015<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [[2015AdvancedGeneMapping|Advanced Gene Mapping Course]], Feb. 9-13, 2015 <br />The Rockefeller University, New York  [https://www.bcm.edu/research/labs/center-for-statistical-genetics/courses/next-generation-sequence-data-course-jun-2014 Analysis of Next Generation Sequence Data Course,]June 23-27, 2014<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [https://www.bcm.edu/research/labs/center-for-statistical-genetics/courses/genetic-association-course-march-2014 Genetic Association Course], March 3-7, 2014<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [https://www.bcm.edu/research/labs/center-for-statistical-genetics/courses/advanced-gene-mapping-course-jan-2014 Advanced Gene Mapping Course], Jan. 27-31, 2014<br />The Rockefeller University<br />New York, NY [https://www.bcm.edu/research/labs/center-for-statistical-genetics/courses/genetic-association-course-june-2013 Genetic Association Course], June 3-7, 2013<br />With Application to Analysis of Sequence and Genotype Data<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [https://www.bcm.edu/research/labs/center-for-statistical-genetics/courses/advanced-gene-mapping-course-jan-2013 Advanced Gene Mapping Course], Jan. 28 -Feb. 1, 2013<br />The Rockefeller University<br />New York, NY [http://linkage.rockefeller.edu/suzanne/Berlin_Basic_Gene_Mapping_Course_2012.htm Basic Gene Mapping Course], Nov. 26-30, 2012<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [http://linkage.rockefeller.edu/suzanne/Berlin_Genetic_Association_Course_2012.html Genetic Association Course], July 23-27, 2012<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany [http://linkage.rockefeller.edu/suzanne/advanced_course_Jan_12 Advanced Gene Mapping Course], Jan. 16-20, 2012<br />The Rockefeller University<br />New York, NY [http://linkage.rockefeller.edu/suzanne/Berlin_Basic_Gene_Mapping_Course_2011.htm Basic Gene Mapping Course], Nov. 7-11, 2011<br />Max Delbrück Center (MDC) for Molecular Medicine<br />Berlin, Germany [http://linkage.rockefeller.edu/suzanne/Berlin_Genetic_Association_Course_2011.html Genetic Association Course], July 4-8, 2011<br />Max Delbrück Center (MDC) for Molecular Medicine<br />Berlin, Germany [http://linkage.rockefeller.edu/suzanne/BCM_Association_Course_2011.html Genetic Association Course], March 22-25, 2011<br />Center for Statistical Genetics<br />Baylor College of Medicine<br />Houston, TX [https://www.bcm.edu/research/labs/center-for-statistical-genetics/courses/advanced-gene-mapping-course-dec-2010 Advanced Gene Mapping Course], Dec. 13-17, 2010<br />The Rockefeller University <br />New York, NY [http://linkage.rockefeller.edu/suzanne/MDC_Berlin_Basic_Gene_Mapping_Course_2010.htm Basic Gene Mapping Course], Oct. 25-29, 2010<br />Max Delbrück Center (MDC) for Molecular Medicine<br />Berlin, Germany [http://linkage.rockefeller.edu/suzanne/MDC_Berlin_Association_Course_2010.html Genetic Association Course], May 3-7, 2010<br />Max Delbrück Center (MDC) for Molecular Medicine<br />Berlin, Germany