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Advgenemap2021

346 bytes removed, 22:37, 24 January 2021
/* Suzanne Leal */
===Suzanne Leal===
[http://www.statgen.us/files/2021/02/bios/about_sml.pdf About Suzanne Leal]
 
====Lectures====
* [[http://statgen.us/files/2021/02/lectures/data_quality_control_1.pdf Data Quality Control]]
====Exercises====
* [[Tutorials#PSEQ|PLINK/SEQ (PSEQ)]] | [httpshttp://githubstatgen.comus/statgeneticsfiles/statgen-courses2021/blob02/masterexercises/dockerPSEQ_exercise.pdf PLINK/pseq.dockerfile dockerfileSEQ (PSEQ)] and * [httpshttp://hub.dockerstatgen.comus/rfiles/statisticalgenetics2021/pseq02/tags docker image]* [[Tutorials#Variant_Association_Tools|exercises/VAT_2021.pdf Association Analysis of Sequence Data using Variant Association Tools for Complex Traits]] | [https://github.com/statgenetics/statgen-courses/blob/master/docker/vat.dockerfile dockerfile] and [https://hub.docker.com/r/statisticalgenetics/vat/tags docker image]
* [http://statgen.us/files/2021/02/exercises/Armitage_sample_size.pdf Cochran Armitage Trend Test for GWAS power analysis]
* [http://statgen.us/files/2021/02/exercises/FunctionalAnnotation.2021.pdf ANNOVAR Annotation] | [https://github.com/statgenetics/statgen-courses/blob/master/docker/annovar.dockerfile dockerfile] and [https://hub.docker.com/r/statisticalgenetics/annovar/tags docker image]
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* [http://statgen.us/files/2021/02/exercises/FunctionalAnnotation.2021.pdf ANNOVAR Annotation] | [https://github.com/statgenetics/statgen-courses/blob/master/docker/annovar.dockerfile dockerfile] and [https://hub.docker.com/r/statisticalgenetics/annovar/tags docker image]
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===Judy Matuk===
[http://www.statgen.us/files/2021/02/bios/about_jm.pdf About Judy Matuk]