Changes

NGSMendelian2017

1,493 bytes added, 19:16, 23 August 2017
/* Course Instructors */
[[File:2017-06-Instructors.jpg|none|224x300px]]
 
===Downloads for Course===
::* Alohomora ([http://gmc.mdc-berlin.de/alohomora/previous_releases/alohomora_v0.32_linux.zip Linux] [http://gmc.mdc-berlin.de/alohomora/previous_releases/alohomora_v0.32-win32.zip Windows])
::* [https://statgen.research.bcm.edu/files/2016/10/data/alohomora.zip Data Set]
::* [https://statgen.research.bcm.edu/files/software/igv/igv-2.3.97.jar igv.jar]
::* [https://statgen.research.bcm.edu/files/2016/10/data/IGVexercise_BAM.zip BAM File]
 
===Software Links===
::* [http://gmc.mdc-berlin.de/alohomora/ Alohomora]
::* [http://www.ncbi.nlm.nih.gov/CBBresearch/Schaffer/fastlink.html FASTLINK]
::* [https://gemini.readthedocs.org/ Gemini]
::* [http://www.broad.mit.edu/ftp/distribution/software/genehunter/ GeneHunter]
::* [http://www.homozygositymapper.org/ Homozygosity Mapper]
::* [https://www.broadinstitute.org/igv/ Integrative Genome Viewer (IGV)] [https://statgen.research.bcm.edu/files/software/igv/igv-2.3.97.jar [download jar]]
::* [http://www.jurgott.org/linkage/LinkagePC.html LINKAGE]
::* [http://csg.sph.umich.edu/abecasis/Merlin/ MERLIN]
::* [http://bioinformatics.org/simped/rare/ RarePedSim]
::* [http://www.bioinformatics.org/seqlink/ SEQLinkage]
::* [http://www.jurgott.org/linkage/SLINK.htm SLINK/MSIM]
::* [http://bioinfo.cs.technion.ac.il/superlink-online/index-working2.shtml SUPERLINK]
::* [http://varianttools.sourceforge.net/Association/HomePage Variant Association Tools]
::* [http://statgen.research.bcm.edu/VMT Variant Mendelian Tools]
 
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