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Tutorials

706 bytes added, 20:40, 20 April 2018
==GWAS: Data Quality Control==
* [http://statgen.us/files/tutorials/gwas-qc/PLINK_data_QC.pdf Exercise <nowiki>[PDF]</nowiki>]
 
====Installing Packages====
To install from packages, follow the configuration steps above and run the following command.
 
<pre>sudo apt-get install plink-tutorial</pre>
The exercise's files will then be installed in /home/shared/Plink_DataQC. You can run from there or copy the files into your user's home directory and proceed with the exercise.
 
==GWAS: Association Analysis Controlling for Population Substructure==
* [http://statgen.us/files/tutorials/gwas-substructure/GWAS_Data_Controlling_for_Substructure.pdf Exercise <nowiki>[PDF]</nowiki>]
 
====Installing Packages====
To install from packages, follow the configuration steps above and run the following command.
 
<pre>sudo apt-get install plink-tutorial</pre>
The exercise's files will then be installed in /home/shared/Plink_substructure. You can run from there or copy the files into your user's home directory and proceed with the exercise.
 
==RV-TDT==
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