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Advgenemap2019

387 bytes removed, 19:01, 20 May 2019
/* More Information */
Tel: +1 (713) 798-4011
Application deadline is Monday, November 12, 2018
[httpshttp://statgen.research.bcm.eduus/files/2019/Application_Advanced_Gene_Mapping_Jan_2019Rockefeller_advanced_course_flyer_2019.html pdf Click here for application formcourse flyer]– Please Post and Distribute
[httpshttp://statgen.research.bcm.edu/files/2019/Rockefeller_advanced_course_flyer_2019.pdf Click here for course flyer] – Please Post and Distribute [https://statgen.research.bcm.eduus/files/2019/adv_gene_mapping_schedule_2019.pdf Click here for course schedule]
===Lecture Handouts===
===Practical Exercises===
* [httpshttp://statgen.research.bcm.eduus/files/2019/01/exercise_booklet_1_24_19.pdf Exercise Booklet]
* [http://statgen.us/files/tutorials/gwas-qc/PLINK_data_QC_V2.pdf Genome-wide Association Analysis - Quality Control - PLINK]
===Exercise Data Sets===
* [httpshttp://statgen.research.bcm.eduus/files/2019/01/datasets/Plink_DataQC.tar.gz Genome-wide Association Analysis - Quality Control - PLINK]* [httpshttp://statgen.research.bcm.eduus/files/2019/01/datasets/Plink_substructure.tar.gz Genome-wide Association Analysis - MDS and PCA – PLINK]* [httpshttp://statgen.research.bcm.eduus/files/2019/01/datasets/FASTLMMLGCTA.tar.gz Family-based Association Analysis- FaST-LMM, PLINK]* [httpshttp://statgen.research.bcm.eduus/files/2019/01/datasets/FASTLMMLGCTA.tar.gz Mixed models Association Analysis Computer – GCTA, PLINK and R]* [httpshttp://statgen.research.bcm.eduus/files/2019/01/datasets/Plink_DataQC.tar.gz Sequence data quality control and association analysis (VAT)]* [httpshttp://statgen.research.bcm.eduus/files/2019/01/datasets/pseq.tar.gz Association Analysis of Sequence Data using PLINK/SEQ (PSEQ)]* [httpshttp://statgen.research.bcm.eduus/files/2019/01/datasets/rvtdt.tar.gz Rare-Variant Transmission Disequilibrium Test (RV-TDT)]* [httpshttp://statgen.research.bcm.eduus/files/2019/01/datasets/FunctionalAnnotation.tar.gz Functional Annotation]* [httpshttp://statgen.research.bcm.eduus/files/2019/01/datasets/mach.tar.gz MaCH]* [httpshttp://statgen.research.bcm.eduus/files/2019/01/datasets/metal.tar.gz METAL]* [httpshttp://statgen.research.bcm.eduus/files/2019/01/datasets/raremetal.tar.gz RAREMETAL]
===Commands===
Bureaucrat, administrator
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