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Advgenemap2019

1,096 bytes added, 13:05, 1 February 2019
/* Practical Exercises */
* [http://statgen.us/files/tutorials/Armitage_sample_size_revised.pdf Cochran Armitage Trend Test]
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===Exercise Data Sets===
* [https://statgen.research.bcm.edu/files/2019/01/datasets/Plink_DataQC.tar.gz Genome-wide Association Analysis - Quality Control - PLINK]
* [https://statgen.research.bcm.edu/files/2019/01/datasets/Plink_substructure.tar.gz Genome-wide Association Analysis - MDS and PCA – PLINK]
* [https://statgen.research.bcm.edu/files/2019/01/datasets/FASTLMMLGCTA.tar.gz Family-based Association Analysis- FaST-LMM, PLINK]
* [https://statgen.research.bcm.edu/files/2019/01/datasets/FASTLMMLGCTA.tar.gz Mixed models Association Analysis Computer – GCTA, PLINK and R]
* [https://statgen.research.bcm.edu/files/2019/01/datasets/Plink_DataQC.tar.gz Sequence data quality control and association analysis (VAT)]
* [https://statgen.research.bcm.edu/files/2019/01/datasets/pseq.tar.gz Association Analysis of Sequence Data using PLINK/SEQ (PSEQ)]
* [https://statgen.research.bcm.edu/files/2019/01/datasets/rvtdt.tar.gz Rare-Variant Transmission Disequilibrium Test (RV-TDT)]
* [https://statgen.research.bcm.edu/files/2019/01/datasets/FunctionalAnnotation.tar.gz Functional Annotation]
===Commands===
Bureaucrat, administrator
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