Changes

Advgenemap2016

7 bytes added, 22:00, 7 June 2016
/* Heather Cordell */
====Gonçalo Abecasis====
* Presentations
** [https://statgen.research.bcm.edu/files/2016012016/01/abecasis/presentationshandouts/Genome-wide_Analysis.pdf Genome-wide Analysis]** [https://statgen.research.bcm.edu/files/2016012016/01/abecasis/presentationshandouts/Genotype_Imputation.pdf Genotype Imputation.pdf]** [https://statgen.research.bcm.edu/files/2016012016/01/abecasis/presentationshandouts/Meta_Analysis.pdf Meta Analysis]** [https://statgen.research.bcm.edu/files/2016012016/01/abecasis/presentationshandouts/Sequence_Data.pdf Sequence Data]
* Exercises
** Data Sets
*** [http://csg.sph.umich.edu/mktrost/seqshopExampleMay2015.tar.gz GotCloud]
*** [http://csg.sph.umich.edu/abecasis/MACH/download/ Mach] (example included with mach program)
*** [http://csg.sph.umich.edu//abecasis/Metal/download/GlucoseExample.tar.gz Metal]
====Heather Cordell====
* Exercises
** [https://statgen.research.bcm.edu/files/2016/01/cordell/exercises/hjc-epistasis2015.html Interaction analysis using PLINK, CASSI, ORMDR and BEAM3]
** [https://statgen.research.bcm.edu/files/2016/01/cordell/dataexercises/cordell.tgz tar.bz2 Download Data Sets] (decompress using "tar zxvf jxvf cordell.tgztar.bz2")
====Nancy Cox/Eric Gamazon====
** [https://statgen.research.bcm.edu/files/2016/01/leal/exercises/Armitage_sample_size_NYC_2016_T_2.doc Armitage Power]
** [https://statgen.research.bcm.edu/files/2016/01/leal/exercises/SEQPower-JAN2016NYC_T3.pdf SEQPower]
** [https://statgen.research.bcm.edu/files/2016/01/leal/data/leal.tgz tar.bz2 Download Data Sets] (decompress using "tar zxvf jxvf leal.tgztar.bz2")** [https://statgen.research.bcm.edu/files/2016/01/leal/data/ExAC.DB.gz bz2 Download ExAC Database] (decompress using "gzip bzip2 -d ExAC.DB.gzbz2")
* Commands
** [https://statgen.research.bcm.edu/files/2016/01/leal/commands/VAT_commands_JAN2016NYC.docx Variant Association Tools]
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