Changes

2016-genetic-association-commands

19 bytes removed, 19:11, 19 May 2017
/* PLINK_R */
snp.data = dbp[,c("affection", "rs1112")]
summary(snp.data)
snp.data[,"rs1112"]<-as.numeric(snp.data[,"rs1112"])-1<br /> summary(snp.data)<br /> result.all=glm(affection ~ rs1112, family=binomial("logit"), data=snp.data)<br /> dev.all = anova(result.all, test="Chi")<br /> summary(result.all) print(dev.all)<br /> snp.data = dbp[,c("affection","trait","sex","age","rs1112","rs1117")]<br /> summary(snp.data)<br /> snp.data[,"rs1112"]<-as.numeric(snp.data[,"rs1112"])-1<br /> snp.data[,"rs1117"]<-as.numeric(snp.data[,"rs1117"])-1<br /> result.adj = glm(affection ~ sex + rs1112, family=binomial("logit"), data=snp.data)<br /> summary(result.adj)
result.adj = glm (affection ~ age + rs1112 , family=binomial("logit"), data=snp.data)
summary(result.adj)
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