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Advanced Gene Mapping (May 2023)
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AdvGeneMap2016Commands
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20:49, 4 January 2017
/* GWAS Control Substructure */
==GWAS Control Substructure==
plink --file GWAS_clean4 --genome --mds-plot 10 --noweb
R
gws_unadj = aff_unadj[which(aff_unadj$P < 0.0000001),]
gws_unadj
gws_adjusted = aff_C1C2[which(aff_C1C2$P < 0.0000001),] gws_adjusted
q()
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