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==Welcome==
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__NOTOC__
We are a group of dedicated statistical geneticists led by Dr. Suzanne M. Leal at Baylor College of Medicine, Houston, Texas. Please visit the [https://www.bcm.edu/research/labs/center-for-statistical-genetics BCM website] to read about our research!
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==Welcome to the Center for Statistical Genetics==
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We are a group of statistical geneticists in [http://columbianeuroresearch.org/sergievsky/ The Gertrude H. Sergievsky Center] and [http://www.columbianeurology.org/ Department of Neurology] at [https://www.ps.columbia.edu Columbia University Vagelos College of Physicians and Surgeons] in New York City. We focus on both the research and education of statistical genetics and genetic epidemiology.
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===Director===
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* [[Suzanne_M_Leal_PhD|Suzanne M. Leal, PhD]]
  
====[https://www.bcm.edu/research/labs/center-for-statistical-genetics/center-members Members of the Center for Statistical Genetics]====
 
====[http://www.ncbi.nlm.nih.gov/myncbi/browse/collection/43289644/?sort=date&direction=ascending Publications]====
 
====[[Genetic Meetings of Interest]]====
 
 
==Statistical Genetics Software==
 
==Statistical Genetics Software==
* [http://tigerwang.org/software/kbac KBAC]
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* [https://github.com/gaow/kbac KBAC]
 
* [https://github.com/statgenetics/mendelprob MendelProb]
 
* [https://github.com/statgenetics/mendelprob MendelProb]
 
* [https://code.google.com/p/phenoman/ PhenoMan]
 
* [https://code.google.com/p/phenoman/ PhenoMan]
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* [http://www.bioinformatics.org/rv-gdt/ RV-GDT]
 
* [http://www.bioinformatics.org/rv-gdt/ RV-GDT]
 
* [http://bioinformatics.org/rv-tdt/wiki/ RV-TDT]
 
* [http://bioinformatics.org/rv-tdt/wiki/ RV-TDT]
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* [https://github.com/statgenetics/rvnpl RV-NPL]
 
* [http://www.bioinformatics.org/seqlink/ SEQLinkage]
 
* [http://www.bioinformatics.org/seqlink/ SEQLinkage]
 
* [http://www.bioinformatics.org/spower/start SEQPower]
 
* [http://www.bioinformatics.org/spower/start SEQPower]
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* [[VMT|Variant Mendelian Tools]]
 
* [[VMT|Variant Mendelian Tools]]
  
==Tutorials==
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==[[Tutorials]]==
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* [[Tutorials#Annotation|Annotation]]
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* [[Tutorials#Cochran_Armitage_Trend_Test|Cochran Armitage Trend Test]]
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* [[Tutorials#GATK_and_IGV|GATK and IGV]]
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* [[Tutorials#GenABEL|GenABEL]]
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* [[Tutorials#GWAS:_Data_Quality_Control|GWAS: QC]]
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* [[Tutorials#GWAS:_Association_Analysis_Controlling_for_Population_Substructure|GWAS: Controlling for Population Substructure]]
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* [[Tutorials#Population_Genetics|Population Genetics]]
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* [[Tutorials#PSEQ|PSEQ]]
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* [[Tutorials#Regression|Regression]]
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* [[Tutorials#RV-TDT|RV-TDT]]
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* [[Tutorials#SEQLinkage|SEQLinkage]]
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* [[Tutorials#SEQSpark|SEQSpark]]
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* [[Tutorials#Variant_Association_Tools|Variant Association Tools]]
  
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<!--
 
===SeqSpark===
 
===SeqSpark===
* [http://statgen.us/files/tutorials/seqspark/SEQSpark_exercise_Final_v3.pdf PDF]
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* [http://statgen.us/files/tutorials/seqspark/SEQSpark_exercise_Final_v4.pdf PDF]
 
* [http://statgen.us/files/images/SEQSpark.ova Virtual Machine Image]
 
* [http://statgen.us/files/images/SEQSpark.ova Virtual Machine Image]
 
* [[Tutorials#SEQSpark|Instructions for package installation]]
 
* [[Tutorials#SEQSpark|Instructions for package installation]]
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===Variant Association Tools===
 
===Variant Association Tools===
 
* [http://statgen.us/files/tutorials/vat/VAT_exercise_2018%20with_graphs.pdf PDF]
 
* [http://statgen.us/files/tutorials/vat/VAT_exercise_2018%20with_graphs.pdf PDF]
 
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-->
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==[[Genetic Meetings of Interest]]==
 
==Statistical Genetics Courses==
 
==Statistical Genetics Courses==
 
[[NGSMendelian2017|Identifying Genes for Mendelian Traits using Next Generation Sequence Data]], September 18-22, 2017<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany
 
[[NGSMendelian2017|Identifying Genes for Mendelian Traits using Next Generation Sequence Data]], September 18-22, 2017<br />Max Delbrück Center for Molecular Medicine<br />Berlin, Germany

Revision as of 14:19, 12 May 2019


Welcome to the Center for Statistical Genetics

We are a group of statistical geneticists in The Gertrude H. Sergievsky Center and Department of Neurology at Columbia University Vagelos College of Physicians and Surgeons in New York City. We focus on both the research and education of statistical genetics and genetic epidemiology.

Director

Statistical Genetics Software

Tutorials

Genetic Meetings of Interest

Statistical Genetics Courses

Identifying Genes for Mendelian Traits using Next Generation Sequence Data, September 18-22, 2017
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Genetic Association Course With Application to Sequence and Genotype Data, June 26-30, 2017
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Complex Trait Analysis of Next Generation Sequence Data, March 6-10, 2017
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Advanced Gene Mapping Course, January 23-27, 2017
The Rockefeller University, New York

Identifying Genes for Mendelian Traits using Next Generation Sequence Data, October 31-November 4, 2016
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Genetic Association Course With Application to Sequence and Genotype Data, September 5-9, 2016
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Complex Trait Analysis of Next Generation Sequence Data, July 4-8, 2016
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Advanced Gene Mapping Course, January 25-29, 2016
The Rockefeller University, New York

Identifying Genes for Mendelian Traits using Next Generation Sequence Data, Sept. 28-Oct. 2, 2015
Max Delbrück Center (MDC) for Molecular Medicine
Berlin, Germany

Genetic Association Course With Application to Sequence and Genotype Data, June 22-26, 2015
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Complex Trait Analysis of Next Generation Sequence Data, March 23-27, 2015
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Advanced Gene Mapping Course, Feb. 9-13, 2015 
The Rockefeller University, New York 

Analysis of Next Generation Sequence Data Course,June 23-27, 2014
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Genetic Association Course, March 3-7, 2014
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Advanced Gene Mapping Course, Jan. 27-31, 2014
The Rockefeller University
New York, NY

Genetic Association Course, June 3-7, 2013
With Application to Analysis of Sequence and Genotype Data
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Advanced Gene Mapping Course, Jan. 28 -Feb. 1, 2013
The Rockefeller University
New York, NY

Basic Gene Mapping Course, Nov. 26-30, 2012
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Genetic Association Course, July 23-27, 2012
Max Delbrück Center for Molecular Medicine
Berlin, Germany

Advanced Gene Mapping Course, Jan. 16-20, 2012
The Rockefeller University
New York, NY

Basic Gene Mapping Course, Nov. 7-11, 2011
Max Delbrück Center (MDC) for Molecular Medicine
Berlin, Germany

Genetic Association Course, July 4-8, 2011
Max Delbrück Center (MDC) for Molecular Medicine
Berlin, Germany

Genetic Association Course, March 22-25, 2011
Center for Statistical Genetics
Baylor College of Medicine
Houston, TX

Advanced Gene Mapping Course, Dec. 13-17, 2010
The Rockefeller University 
New York, NY

Basic Gene Mapping Course, Oct. 25-29, 2010
Max Delbrück Center (MDC) for Molecular Medicine
Berlin, Germany

Genetic Association Course, May 3-7, 2010
Max Delbrück Center (MDC) for Molecular Medicine
Berlin, Germany